Science Simplified!

                       JAI VIGNAN

All about Science - to remove misconceptions and encourage scientific temper

Communicating science to the common people

'To make  them see the world differently through the beautiful lense of  science'

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  • Dr. Krishna Kumari Challa

    The telescope is on a 30-day long journey to cover the 15,00,000 kilometers distance between Earth and its intended orbit. It will reach the location by the end of January.

    Source: https://www.indiatoday.in/science/story/where-is-james-webb-telesco...

    Part 4

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  • Dr. Krishna Kumari Challa

    Mountain spring water isn't as clean as you think it is

     Mountain spring water is often touted as the cleanest water you can drink. But a new study revealed this isn't the case.

    Using data collected over 40 years, researchers detailed how water quality in high-elevation streams has been negatively affected by a combination of historical events and modern changes, namely sediment from rural roads and agricultural runoff.

    Unpaved roads are just one of several factors contributing to sediment runoff.

    When streams carry a lot of sediment, it makes it more difficult for animals to see food in the water, and it affects fish growth and disease resistance. Sediment also continues to flow downstream and into public water supplies, where it costs cities and towns more to filter.

    The landscape you see now isn't what it was like in 1900. For generations, people farmed the valleys  and left the hillsides forested, for hunting and gathering. But the new settlers cut the forests and even tried to farm the hills, causing erosion and sediment to move into the streams. Today, stream beds continue to show evidence of sediment deposited more than a century ago, even as new sediment pushes through the waters.

    Many years later, a new kind of development in the region created a different kind of land disturbance. For generations, residents considered the steep mountain slopes undevelopable. But the 1980s and '90s brought a desire for mountain getaway homes with views.

    By building homes on mountain ridges, he said, it created more land disturbance through carving out unpaved roads and cutting into hillsides, sometimes creating landslides.

    "Roadside ditches and unpaved roads produce a lot of sediment, and their sediment production increases as roads get steeper and as gravel roads get more use. in areas with both mountain and valley development, the researchers found sediment concentrations four to six times higher.

    Farming also takes its toll. The studies researchers analyzed found many streams in the area to have high nutrient concentrations—particularly nitrate. When a stream flowing through a pasture loses its buffer of trees, it loses a natural protection against nutrient runoff.

    Streams without shade also have higher water temperatures.

    The paper was published earlier this month in the journal Bioscience.

    C Rhett Jackson et al, Distinctive Connectivities of Near-Stream and Watershed-Wide Land Uses Differentially Degrade Rural Aquatic Ecosystems, BioScience (2021). DOI: 10.1093/biosci/biab098

    https://researchnews.cc/news/10775/Mountain-spring-water-isn-t-as-c...

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  • Dr. Krishna Kumari Challa

    Snapshots from high in the sky allow new insight into ecosystems around the world

  • Dr. Krishna Kumari Challa

    Heavy metals have a reputation for being dangerous, but some are essential nutrients that you can't live without.

  • Dr. Krishna Kumari Challa

    Rethinking how drugs are administered: A breakthrough in microneedle patches

    The painful feeling of receiving an injection through a hypodermic needle or with the unpleasant sensation of swallowing a large pill is a globally familiar sensation. But what if a revolutionary and gentler way of administering drugs was in the works? For over two decades, researchers have been investigating various types of microneedles as a minimally invasive method for transdermal drug delivery. Arrays of microneedles can be designed to be loaded with a drug or chemical, which they then release over time onto the blood stream after piercing slightly beyond the skin layers.

    Microneedles offer several advantages compared to other types of drug delivery. First, they are painless and cause virtually no damage to the skin nor bleeding. Second, they can be self-administered. Third, unlike traditional needles, the disposal of microneedles is much easier as they don't leave behind hazardous waste. Unfortunately, there are still a few challenges that need to be addressed before microneedles become the next big thing in healthcare. One is their fabrication cost, which generally involves expensive molds, materials, and machinery. Another issue is the aggregation and degradation of proteins when microneedles are pre-loaded with a protein-based medicine, as these molecules are quite sensitive to external conditions such as temperature, acidity and salt concentration.

    In a recent study published in Biomacromolecules, two research teams from Japan and Thailand collaborated to address the main limitations of existing microneedles.

    One team developed and applied a functional polymer that effectively suppresses protein aggregation. The other team perfected a microneedle fabrication method suitable for the industrial scale based on photolithography. By combining these two efforts, the teams managed to produce microneedles patches with several attractive properties and potential scalability to clinical settings.

    Part 1

  • Dr. Krishna Kumari Challa

    The microneedles themselves are made of a non-degradable, biocompatible hydrogel that also contains zwitterionic poly-sulfobetaine (poly-SPB). As reported in previous studies by the same authors, this polymer suppresses protein aggregation. Thus, the researchers incorporated it during the fabrication process and showed that the proteins pre-loaded in the microneedles were stable even when subjected to various external stresses.

    Additionally, the scientists developed a straightforward and cost-effective way to fabricate microneedle arrays made from the abovementioned materials. They resorted to photolithography, a process in which a photomask is used to selectively block UV light from reaching a target surface to control chemical reactions locally.

    To test the performance of these microneedle arrays for drug delivery, the researchers loaded them with 50 microliters of drug solutions containing rhodamine B as a dye alongside lysozyme and insulin as example proteins. Through various experiments on porcine skin, the teams verified that their microneedle patches offered both high drug-loading capacity and high drug-release rate. Moreover, they confirmed that the microneedles could both load and preserve various water-soluble drugs and proteins simultaneously, eliminating the need for refrigeration.

    Overall, the proposed microneedle arrays seem to be a remarkably promising platform for administering therapeutic drugs and vaccines.

    Harit Pitakjakpipop et al, Facile Photolithographic Fabrication of Zwitterionic Polymer Microneedles with Protein Aggregation Inhibition for Transdermal Drug Delivery, Biomacromolecules (2021). DOI: 10.1021/acs.biomac.1c01325

    https://medicalxpress.com/news/2021-12-rethinking-drugs-breakthroug...

    Part 2

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  • Dr. Krishna Kumari Challa

    Quantum Computers, Explained With Quantum Physics

  • Dr. Krishna Kumari Challa

    The Final moments: Brain Death and the process of stopping it

    For years, scientists have researched what happens to your brain when you die, but despite everything we've found out, progress has been stymied by an inability to easily monitor human death – since physicians are conventionally obliged to prevent death if they can, not monitor it as it takes hold. What this means is most of our understanding of the processes involved in brain death come from animal experiments, strengthened with what we can glean from the accounts of resuscitated patients disclosing their near-death experiences. But in 2018, an international team of scientists made a breakthrough. In animals, within 20 to 40 seconds of oxygen deprivation, the brain enters an 'energy-saving mode' where it becomes electrically inactive and neurons cease communicating with one another. After a few minutes, the brain begins to break down as ion gradients in cells dissipate, and a wave of electrochemical energy – called a spreading depolarisation (or 'brain tsunami') spreads throughout the cortex and other brain regions, ultimately causing irreversible brain damage.

    A team of neurologists  – who monitored these processes taking place in nine patients with devastating brain injuries (under Do Not Resuscitate – Comfort Care orders) – say the tsunami of brain death may actually be capable of being stopped.

    After circulatory arrest, spreading depolarisation marks the loss of stored electrochemical energy in brain cells and the onset of toxic processes that eventually lead to death. But it is reversible – up to a point – when the circulation is restored.

    Using neuro-monitoring technology called subdural electrode strips and intraparenchymal electrode arrays, the researchers monitored spreading depolarisation in the patients' brains, and they suggest it's not a one-way wave – as long as circulation (and thus oxygen supply) can be resumed to the brain.

    "Anoxia-triggered [spreading depolarisation] is fully reversible without any signs of cellular damage, if the oxidative substrate supply is re-established before the so-called commitment point, defined as the time when neurons start dying under persistent depolarisation. For patients at risk of brain damage or death incurred through cerebral ischemia or other kinds of stroke, the findings could one day be a life-saver, although the researchers explain a lot more work is needed before physicians will be able to take advantage of these discoveries.

    https://onlinelibrary.wiley.com/doi/full/10.1002/ana.25147

    https://www.sciencealert.com/death-bringing-brain-tsunamis-have-bee...

  • Dr. Krishna Kumari Challa

    Scientists digitally 'unwrap' mummy of pharaoh Amenhotep I for the first time in 3,000 years

    All the royal mummies found in the 19th and 20th centuries have long since been opened for study. With one exception: egyptologists have never been bold enough to open the mummy of Pharaoh Amenhotep I. Not because of any mythical curse, but because it is perfectly wrapped, beautifully decorated with flower garlands, and with face and neck covered by an exquisite lifelike facemask inset with colorful stones. But now for the first time, scientists from Egypt have used three-dimensional CT (computed tomography) scanning to 'digitally unwrap' this royal mummy and study its contents. They report their findings in Frontiers in Medicine.

    This was the first time in three millennia that Amenhotep's mummy has been opened. The previous time was in the 11th century BCE, more than four centuries after his original mummification and burial. Hieroglyphics have described how during the later 21st dynasty, priests restored and reburied royal mummies from more ancient dynasties, to repair the damage done by grave robbers.

    "This fact that Amenhotep I's mummy had never been unwrapped in modern times gave us a unique opportunity: not just to study how he had originally been mummified and buried, but also how he had been treated and reburied twice, centuries after his death.

    By digitally unwrapping of the mummy and 'peeling off' its virtual layers—the facemask, the bandages, and the mummy itself—researchers could study this well-preserved pharaoh in unprecedented detail.

    The things that were found during the study:  

    Amenhotep I was approximately 35 years old when he died. He was approximately 169cm tall, circumcized, and had good teeth. Within his wrappings, he wore 30 amulets and a unique golden girdle with gold beads."

    Amenhotep I seems to have physically resembled his father: he had a narrow chin, a small narrow nose, curly hair, and mildly protruding upper teeth. Researchers couldn't find any wounds or disfigurement due to disease to justify the cause of death, except numerous mutiliations post mortem, presumably by grave robbers after his first burial. His entrails had been removed by the first mummifiers, but not his brain or heart.

    at least for Amenhotep I, the priests of the 21st dynasty lovingly repaired the injuries inflicted by the tomb robbers, restored his mummy to its former glory, and preserved the magnificent jewelry and amulets in place.

    Sahar N. Saleem et al, Digital Unwrapping of the Mummy of King Amenhotep I (1525–1504 BC) Using CT, Frontiers in Medicine (2021). DOI: 10.3389/fmed.2021.778498

    https://phys.org/news/2021-12-scientists-digitally-unwrap-mummy-pha...

  • Dr. Krishna Kumari Challa

    In a neuroprosthetic first, ALS patient sends social media message via brain-computer interface

    A 62-year-old amyotrophic lateral sclerosis (ALS) patient in Australia recently became the first person to post a message on social media using only his thoughts. On December 23, he posted an initial brief message, "Hello World," on Twitter.

    The technology that allowed the patient  to send his message was developed by a brain computer interface company,  and the device is called the Stentrode Brain Computer Interface (SBCI); a type of endovascular brain implant. It was implanted into the patient's brain without opening his skull—instead, it was inserted through his jugular vein. The tiny (8 mm) brain implant was designed to allow people who have lost the ability to speak to communicate using only their thoughts. The SBCI is wireless and works by reading brainwaves and translating them to words—the motor neuroprosthesis was placed into the patient's brain using techniques that have been used for several years to treat people with strokes. Human clinical trials have been underway  for over a year—currently, the device has been implanted in just one other person, but more are planned.

    The patient e is now able to compose messages by thinking of words or actions (such as mouse clicks), which are translated to activity on a computer screen.

    https://techxplore.com/news/2021-12-neuroprosthetic-als-patient-soc...

  • Dr. Krishna Kumari Challa

    Ubiquitin and Parkinson's Disease 

  • Dr. Krishna Kumari Challa

    Universal COVID test based on isothermal amplification can detect all COVID-19 variants

    Russian researchers have developed a strategy to create a cheap and rapid COVID-19 test based on isothermal amplification. According to their publication in Applied Biochemistry and Microbiology, use of this strategy will make it possible to create universal test systems for any of the COVID-19 variants.

    The Russian researchers developed a strategy that will help overcome earlier drawbacks and give healthcare professionals an opportunity to use LAMP testing to detect traces of any COVID variants in samples of mucus and blood without preliminary processing in a laboratory. This will decrease the cost of COVID-19 tests considerably and speed up the process, since no specially trained professionals or expensive equipment will be needed.

    The virus mutates quite fast, and the test systems that were created a year ago may be not as effective as they used to be. Researchers now analyze the mutations and are looking for the most stable parts of the virus genome. This will help create test systems that recognize all the existing variants and, importantly, the new variants that are appearing.

    To solve this challenge, HSE biologists are looking for parts of the coronavirus genome that do not change much over time. They will serve as markers that bacteria ferments will use to convert the COVID RNA into DNA and multiply it further. Combined with the existing LAMP system components, they will help create a universal COVID-19 testing system, which will be able to quickly detect traces of any COVID variants, the researchers say.

    J. A. Makarova et al, Loop-Mediated Isothermal Amplification as a Promising Method for Mass COVID-19 Diagnostics, Applied Biochemistry and Microbiology (2021). DOI: 10.1134/S0003683821080032

    https://medicalxpress.com/news/2021-12-universal-covid-based-isothe...

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  • Dr. Krishna Kumari Challa

     Lab experiments show how cells 'eat'

    A new study shows how cell membranes curve to create the "mouths" that allow the cells to consume things that surround them.

    The study found that the intercellular machinery of a cell assembles into a highly curved basket-like structure that eventually grows into a closed cage. Membrane curvature is important: It controls the formation of the pockets that carry substances into and out of a cell.

    The pockets capture substances around the cell, forming around the extracellular substances, before turning into vesicles—small sacs one-one millionth the size of a red blood cell. Vesicles carry important things for a cell's health—proteins, for example—into the cell. But they can also be hijacked by pathogens that can infect cells.

    But the question of how those pockets formed from membranes that were previously believed to be flat had stymied researchers for nearly 40 years. Scientists now were able to use super-resolution fluorescence imaging to actually watch these pockets form within live cells, and so they could answer that question of how they are created.

    Experiments revealed that protein scaffolds start deforming the underlying membrane as soon as they are recruited to the sites of vesicle formation. The way cells consume and expel vesicles plays a key role for living organisms. The process helps clear bad cholesterol from blood; it also transmits neural signals. The process is known to break down in several diseases, including cancer and Alzheimer's disease.

    Understanding the origin and dynamics of membrane-bound vesicles is important—they can be utilized for delivering drugs for medicinal purposes, but at the same time, hijacked by pathogens such as viruses to enter and infect cells. These results matter, not only for our understanding of the fundamentals of life, but also for developing better therapeutic strategies.

     Nathan M. Willy et al, De novo endocytic clathrin coats develop curvature at early stages of their formation, Developmental Cell (2021). DOI: 10.1016/j.devcel.2021.10.019

    https://phys.org/news/2021-12-high-resolution-lab-cells.html?utm_so...

  • Dr. Krishna Kumari Challa

    India saw record 126 tiger deaths in 2021

    India's tiger conservation body said 126 of the endangered big cats died in 2021, the most since it began compiling data a decade ago.

    It is believed there were around 40,000 tigers at the time of independence in 1947 but hunting and habitat loss has slashed the population to dangerously low levels.

    In 2010, India and 12 other countries signed an agreement to double tiger numbers by 2022.

    Over the past decade the biggest reason for deaths recorded by the NTCA was "natural causes", but many also fell victim to poachers and "human-animal conflict".

    Human encroachment on tiger habitats has increased in recent decades in the country of 1.3 billion people. This caused human deaths too deaths due to human-animal conflict and were driven by "the fragmentation of the tiger's natural habitat." Tigers range over large jungle areas and find it impossible to migrate to other forests without crossing human habitations, increasing chances of conflict. Critics also say that the government has also loosened environmental regulations for projects including mining.

    Increasing demand for tiger skins and use of tiger body parts in traditional Chinese medicine were some of the major reasons for poaching.

    The government has made efforts to manage the tiger population better, however, reserving 50 habitats across the country for the animals. But tigers were still under threat from poaching and habitat destruction and the wild animal populations had fragmented, increasing the risk of inbreeding.

    Many tiger populations were confined to small protected areas.

    Many of the "habitat corridors" enabling the animals to roam between these areas were at risk due to human activity and development. 

    https://phys.org/news/2021-12-india-tiger-deaths.html?utm_source=nw...

  • Dr. Krishna Kumari Challa

    A Novel Approach to Target Enhancer-Addicted Cancers

  • Dr. Krishna Kumari Challa

    Science’s 2021 Breakthrough of the Year: AI brings protein structures to all

  • Dr. Krishna Kumari Challa

    2021's Breakthroughs in Neuroscience and Other Biology

    2021's Biggest Breakthroughs in Physics
  • Dr. Krishna Kumari Challa

    HIV patients 'cured' by their own unique biology may harbor secrets to end the global scourge

    Some people diagnosed with HIV are able to eradicate the virus without antiretroviral medications or even stem cell transplants, possessing the ability to naturally suppress the virus and achieve a medically verifiable cure.

    Scientists call this small population elite controllers, a moniker that reflects their unique ability to keep one of the most notorious viruses at bay.

    Two of these patients have garnered fame in the scientific literature in recent months, each known mostly by a code name: the San Francisco Patient, and another called the Esperanza Patient. Both are women who have been spotlighted in medical journals and at scientific conferences for having eradicated HIV from their bodies.

    Beyond those two celebrated examples, new research from the Ragon Institute in Boston has zeroed in on a larger group of elite controllers—58 altogether—who have also been able to keep the virus at bay by virtue of their distinct biological capabilities. The elite controllers were compared with 42 HIV patients on antiretroviral therapy, people who represent the vast majority of those diagnosed globally with HIV.

    Writing in Science Translational Medicine, immunologists at the institute report that they have uncovered a deep well of new clues that point to elite controllers' unusual ability to eradicate the virus. One reason is a powerful immune response, but another centers on where latent viral genetic sequences are stranded in the human genome. These sequences tend to be in tucked into chromosomes in remote regions where they're less likely to replicate, but more likely to be found by immune forces.

    The research is opening a new window of understanding into what it means to be infected with HIV, a virus that is estimated to affect 38 million people globally. Millions worldwide have died since the HIV pandemic began 40 years ago.

    Most patients take antiretroviral drugs for life to hold the virus in check, but elite controllers can handily subdue HIV for long periods without the need for medications. Although the San Francisco Patient was infected in 1992, she has kept the virus at bay for decades. Her existence—and that of other elite controllers—defies the long-held dogma that HIV infection is invariably for life.

    Part 1

  • Dr. Krishna Kumari Challa

    The new findings join a growing body of work that may eventually lay the groundwork for future pharmaceutical interventions to help the vast majority of HIV patients eliminate the virus based on principles scientists are learning from elite controllers, people who have achieved so-called "sterilizing cures."

    "Increasing evidence suggests that durable drug-free control of HIV-1 replication is enabled by effective cellular immune responses. Data from their experimental work suggest that viable human immunodeficiency viruses in elite controllers may face greater pressure from immune system cells. As a result, the viruses are unable to dodge the immune system's formidable army.

     Xiaodong Lian, et al, Signatures of immune selection in intact and defective proviruses distinguish HIV-1 elite controllers, Science Translational Medicine (2021) DOI: 10.1126/scitranslmed.abl4097

    https://medicalxpress.com/news/2021-12-hiv-patients-unique-biology-...

    Part 2

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  • Dr. Krishna Kumari Challa

    No convincing scientific evidence that hangover cures work, according to new research

    A new systematic review has found only very low-quality evidence that substances claiming to treat or prevent alcohol-induced hangover work.

    The researchers call for more rigorous scientific exploration of the effectiveness of these remedies for hangovers to provide practitioners and the public with accurate evidence-based information on which to make their decisions.

    A team of researchers  conducted a systematic review to consolidate and assess the current evidence for hangover treatments.

    The study, published recently by the scientific journal Addiction, assessed 21 placebo-controlled randomized trials of clove extract, red ginseng, Korean pear juice, and other hangover cures. Although some studies showed statistically significant improvements in hangover symptoms, all evidence was of very low quality, usually because of methodological limitations or imprecise measurements. In addition, no two studies reported on the same hangover remedy and no results have been independently replicated.

    Of the 21 included studies, eight were conducted exclusively with male participants. The studies were generally limited in their reporting of the nature and timing of alcohol challenge that was used to assess the hangover cures and there were considerable differences in the type of alcohol given and whether it was given alongside food.

    Common painkillers such as paracetamol or aspirin have not been evaluated in placebo controlled randomized controlled trials for hangover

    According to the researchers, future studies should be more rigorous in their methods, for example by using validated scales to assess hangover symptoms. There is also a need to improve the participation of women in hangover research.

    The hangover cures assessed in this study included Curcumin, Duolac ProAP4 (probiotics), L-cysteine, N-Acetyl-L-Cysteine (NAC), Rapid Recovery (L-cysteine, thiamine, pyridoxine and ascorbic acid), Loxoprofen (loxoprofen sodium), SJP-001 (naproxen and fexofenadine), Phyllpro (Phyllanthus amarus), Clovinol (extract of clove buds), Hovenia dulcis Thunb. fruit extract (HDE), Polysaccharide rich extract of Acanthopanax (PEA), Red Ginseng, Korean Pear Juice, L-ornithine, Prickly Pear, Artichoke extract, 'Morning-Fit' (dried yeast, thiamine nitrate, pyridoxine hydrochloride, and riboflavin), Propranolol, Tolfenamic acid, Chlormethiazole, and Pyritinol.

    Emmert Roberts et al, The efficacy and tolerability of pharmacologically active interventions for alcohol‐induced hangover symptomatology: A systematic review of the evidence from randomised placebo‐controlled trials, Addiction (2022). DOI: 10.1111/add.15786

    https://medicalxpress.com/news/2022-01-convincing-scientific-eviden...

  • Dr. Krishna Kumari Challa

    Microorganism sheds new light on cancer resistance

    A simple, marine-dwelling creature known as Trichoplax adhaerens has some remarkable properties. The organism can tolerate unusually high doses of radiation that would kill most other forms of life. T. adhaerens has another intriguing characteristic: the ability to resist cancer.

    In a new study scientists found  T. adhaerens' unusual behavior, including its capacity to repair its DNA even after significant radiation damage and to extrude injured cells, which later die.

    The findings advance scientific investigations of natural cancer-suppression mechanisms across life. Insights gleaned from these evolutionary adaptations may find their way into new and more effective therapies for this leading killer.

    The unusual microorganism observed in the new study is rudimentary in form and easily cultured in the lab. This makes T. adhaerens an attractive model organism, enabling researchers to home in on fundamental processes of radiation tolerance as well as the underlying mechanisms guiding DNA repair, programmed cell death and other natural means of cancer resistance.

    Part 1

  • Dr. Krishna Kumari Challa

    Over the course of evolution, some species have developed powerful means of suppressing cancer. Generally, they do this either by trying to prevent mutations from arising in the first place, improving the fidelity of DNA copying mechanisms or by repairing damaged DNA, or some combination of these.

    Often, crucial cancer-related genes come into play. One of these, a tumor-suppressing gene known as TP53, can act to repair damaged DNA. Where the sequence can not be repaired, the gene instructs the cell to undergo apoptosis or cell death, preventing the mutation from being duplicated in subsequent cell generations. Elephants, which would otherwise be highly cancer prone due to their size and longevity, carry multiple copies of TP53 and have very low rates of cancer.

    Although high radiation caused catastrophic damage to T. adhaerens' DNA, the animal's powers of DNA repair enabled the organism to recover from the assault. Although not all individuals survived the highest doses of radiation, those that did were able to repopulate the culture after 30 days of exposure to 218.6 Gy. A total of 74 genes were significantly overexpressed in T. adhaerens following radiation exposure.

    Through a combination of aggressive DNA repair and ejection of damaged cells, T. adhaerens engage in continual bodily renewal, keeping them cancer-free. Understanding such mechanisms may spur new methods of preventing and treating the disease in humans. Other, as -yet-to be discovered genes likely play a role in T. adhaerens' remarkable resistance to cancer, making this tiny creature a treasure chest of information.

     Angelo Fortunato et al, Upregulation of DNA repair genes and cell extrusion underpin the remarkable radiation resistance of Trichoplax adhaerens, PLOS Biology (2021). DOI: 10.1371/journal.pbio.3001471

    https://phys.org/news/2022-01-microorganism-cancer-resistance.html?...

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    Part 2

  • Dr. Krishna Kumari Challa

    Scientists discover emergency pathway to help human cells with protein damage survive

    Cell proteins damaged by oxygen radicals can be chemically "tagged" for elimination, but an "emergency pathway" bypasses strict protocol and can eliminate even without the need for prior tagging.

    An international research team headed by Technion scientists has found an alternative manner for eliminating damaged proteins when the cells are impaired by "oxygen radicals," as can happen in failing human hearts where there is poor cell respiration and cells become oxygen depleted, or suffer "hypoxia," because of poor oxygen uptake.

    Significantly, the researchers discovered that there can be a shift from the tightly controlled process of eliminating proteins in the cells to a less strict mechanism when cells enter an "emergency protocol." This shift can "clear up" the toxic proteins before their toxicity levels get too high.

    Human cells—both functional and damaged—are constantly recycled by chemically "tagging" and targeting for removal when they are under stress by the ubiquitin system (2004 Nobel Prize in chemistry). At the same time, a few proteins that are intact and functional can also be dragged into the 20S proteasome "molecular disposal unit" along with the toxic proteins that have be targeted for destruction. Nevertheless, rather than harm cells, this mode of action by 20S proteasome may aid cells in rapidly remove toxic proteins. In their conclusion, the authors raised the interesting speculation that this emergency pathway can help even damaged cells to withstand bouts of stress and allow them to "age gracefully."

    Indrajit Sahu et al, The 20S as a stand-alone proteasome in cells can degrade the ubiquitin tag, Nature Communications (2021). DOI: 10.1038/s41467-021-26427-0

    https://phys.org/news/2022-01-scientists-emergency-pathway-human-ce...

  • Dr. Krishna Kumari Challa

    How To Kick A Pulsar Out Of The Galaxy

    The Baseline #10 - How To Kick A Pulsar Out Of The Galaxy from NRAO Outreach on Vimeo.

  • Dr. Krishna Kumari Challa

    Newly-discovered protein in the rod cells of the retina helps us see in dim light

     scientists have shed light on an important component of the eye: a protein in the rod cells of the retina which helps us see in dim light. Acting as an ion channel in the cell membrane, the protein is responsible for relaying the optical signal from the eye to the brain. If a genetic disorder disrupts the molecular function in a person, they will go blind. Scientists have deciphered the protein's three-dimensional structure, preparing the way for innovative medical treatments. The study is published in the scientific journal Nature Structural & Molecular Biology.

    It's thanks to the rod cells in our eye that we can observe the stars in the night sky.

    These photo cells are so sensitive to light that they can detect even a single photon reaching us from a very remote part of the universe—a truly incredible feat." The ability of our brain to eventually translate these light beams into a visual impression is partly down to the cyclic nucleotide-gated (CNG) ion channels whose three-dimensional structure has now been illuminated by a  research group.

    The ion channel acts as a gatekeeper controlling whether specific particles are allowed through to the interior of the receptor cell. It is embedded in the protein-rich shell—the cell membrane—of the rod cells. In darkness, the ion channel, and thus the gate to the cell, is completely open. But when light hits the eye, it triggers a cascade of processes in the rod cells. This ultimately causes the gate to close, with the result that positively charged particles, such as calcium ions, can no longer enter into the cell.

    This electrochemical signal continues via the nerve cells into the brain's visual cortex, where a visual impression—such as a flash of light—is created. The scientists  used cryo-electron microscopy to reveal the three-dimensional structure of the ion channel.

    Part 1

  • Dr. Krishna Kumari Challa

    One of the reasons why a clearer understanding of the channel protein's natural structure is important is to advance the development of treatments for genetic disorders for which there is no known cure, such as retinitis pigmentosa. With this disease, photoreceptors gradually die off, leaving people blind. One possible cause is that the body is unable to correctly produce the CNG channel protein due to a genetic defect. As a result, the ion channel does not close completely when light hits the eye, disrupting the cell's electrochemical balance and causing the cells to die.

    If we could find molecules that affect the protein in such a way that the channel would completely close, we could prevent the cells from dying—and thus stop people going blind.

     Now that researchers have identified the precise structure of the protein they are able to search specifically for such molecules.

    The protein comprises four parts: three lots of subunit A, and one lot of subunit B. A correctly functioning ion channel is only possible in this combination. In their study, PSI scientists show why the B subunit seems to play such an important role: a side arm of the protein—a single amino acid—protrudes from the rest of the protein, like a barrier across a gateway. This narrows the passage in the channel to the point where no ions can pass through.

     It is interesting to note that the additional barrier is found not only in the protein from the cow's eye, but seems to apply to all types of animal, as the scientists showed. Whether crocodiles, eagles or humans—all living creatures with an ion channel in their eye have the same protruding amino acid at this position in the protein. As it has been preserved so consistently during evolution, it must be essential for the functioning of the channel.

    Diane C. A. Barret et al, The structure of the native CNGA1/CNGB1 CNG channel from bovine retinal rods, Nature Structural & Molecular Biology (2021). DOI: 10.1038/s41594-021-00700-8

    https://phys.org/news/2022-01-newly-discovered-protein-rod-cells-re...

    **

  • Dr. Krishna Kumari Challa

    Researchers gain insights into how ultrasmall bacteria from the environment have adapted to live inside humans

    The microbes that live inside our mouths, collectively known as the oral microbiome, impact our overall health in many ways that are not yet fully understood. Some bacteria cause inflammation, leading to periodontitis and other systemic diseases, such as cardiovascular disease and diabetes. Other oral organisms have been associated with certain types of cancer. Scientists are working to understand how these microbes interact with one another and our bodies to tease out their individual roles in health and disease.

    Among the diverse bacterial species living within our mouths is a group belonging to the Candidate Phyla Radiation (CPR). These bugs are especially mysterious because they are ultra-small, adopt a unique symbiotic lifestyle with their host bacteria, and most have yet to be cultured by scientists and studied in the lab. The only bacteria within the CPR to be examined in-depth are a group called TM7, which were cultivated for the first time in 2014.

    Now scientists have developed a new model system using the first isolated human oral TM7 strain, TM7x, and its host bacterium, Actinomyces odontolyticus. Researchers used the model system to experimentally study these tiny bacteria, testing a hypothesis for how TM7 adapted to live inside humans, and providing empirical data to confirm previous genomic studies. Their findings were published today in the journal Proceedings of the National Academy of Sciences (PNAS).

    Scientists have found TM7 in many different environments, including soil, groundwater, and the bodies of other mammals. Studies have shown that while maintaining a remarkably similar genome overall, the TM7 found in human mouths are unique from those in other environments because they have acquired a gene cluster encoding the arginine deiminase system, or ADS.

    Researchers hypothesized that TM7 acquired ADS as an evolutionary advantage to help them adapt and survive in the human oral cavity. They tested this and found  found that ADS helped TM7x break down arginine, a process that produces the compounds Adenosine triphosphate (ATP) and ammonia. The increased abundance of ATP and ammonia benefitted TM7x by increasing its infectivity, or ability to multiply. It also protected TM7x and its host bacterium from acid stress, a condition that microbes frequently encounter in the human oral cavity due to the acid created when bacteria feed on and metabolize dietary carbohydrates. Ultimately, the experiments showed TM7x were able to survive in the experimental environment for longer than they could without the addition of arginine, thanks to ADS.

    Earlier study: Otari Chipashvili et al, Episymbiotic Saccharibacteria suppresses gingival inflammation and bone loss in mice through host bacterial modulation, Cell Host & Microbe (2021). DOI: 10.1016/j.chom.2021.09.009

    Acquisition of the arginine deiminase system benefits epiparasitic Saccharibacteria and their host bacteria in a mammalian niche environment, Proceedings of the National Academy of Sciences (2022). DOI: 10.1073/pnas.2114909119.

    https://phys.org/news/2022-01-gain-insights-ultrasmall-bacteria-env...

  • Dr. Krishna Kumari Challa

    Scientists reveal the genetic basis of mitochondrial diseases

    Mutations in genes encoding mitochondrial aminoacyl-tRNA synthetases are linked to diverse diseases. However, the precise mechanisms by which these mutations affect mitochondrial function and disease development are not fully understood.

    Wenlu Fan et al, FARS2 deficiency in Drosophila reveals the developmental delay and seizure manifested by aberrant mitochondrial tRNA metabolism, Nucleic Acids Research (2021). DOI: 10.1093/nar/gkab1187

    https://phys.org/news/2022-01-scientists-reveal-genetic-basis-mitoc...

    **

  • Dr. Krishna Kumari Challa

    Researchers find a new route for regulating blood sugar levels independent of insulin

    The discovery of insulin 100 years ago opened a door that would lead to life and hope for millions of people with diabetes. Ever since then, insulin, produced in the pancreas, has been considered the primary means of treating conditions characterized by high blood sugar (glucose), such as diabetes. Now, scientists have discovered a second molecule, produced in fat tissue, that, like insulin, also potently and rapidly regulates blood glucose. Their finding could lead to the development of new therapies for treating diabetes, and also lays the foundation for promising new avenues in metabolism research.

    The study, which was published in Cell Metabolism on January 4, 2022, shows that a hormone called FGF1 regulates blood glucose by inhibiting fat breakdown (lipolysis). Like insulin, FGF1 controls blood glucose by inhibiting lipolysis, but the two hormones do so in different ways. Importantly, this difference could enable FGF1 to be used to safely and successfully lower blood glucose in people who suffer from insulin resistance.

    Finding a second hormone that suppresses lipolysis and lowers glucose is a scientific breakthrough. Scientists have identified a new player in regulating fat lipolysis that will help us understand how energy stores are managed in the body.

    Part 1

  • Dr. Krishna Kumari Challa

    When we eat, energy-rich fats and glucose enter the bloodstream. Insulin normally shuttles these nutrients to cells in muscles and fat tissue, where they are either used immediately or stored for later use. In people with insulin resistance, glucose is not efficiently removed from the blood, and higher lipolysis increases the fatty acid levels. These extra fatty acids accelerate glucose production from the liver, compounding the already high glucose levels. Moreover, fatty acids accumulate in organs, exacerbating the insulin resistance—characteristics of diabetes and obesity.

    Previously, the lab showed that injecting FGF1 dramatically lowered blood glucose in mice and that chronic FGF1 treatment relieved insulin resistance. But how it worked remained a mystery.

    In the current work, the team investigated the mechanisms behind these phenomena and how they were linked. First, they showed that FGF1 suppresses lipolysis, as insulin does. Then they showed that FGF1 regulates the production of glucose in the liver, as insulin does. These similarities led the group to wonder if FGF1 and insulin use the same signaling (communication) pathways to regulate blood glucose.

    It was already known that insulin suppresses lipolysis through PDE3B, an enzyme that initiates a signaling pathway, so the team tested a full array of similar enzymes, with PDE3B at the top of their list. They were surprised to find that FGF1 uses a different pathway—PDE4.

    "This mechanism is basically a second loop, with all the advantages of a parallel pathway. In insulin resistance, insulin signaling is impaired. However, with a different signaling cascade, if one is not working, the other can. That way you still have the control of lipolysis and blood glucose regulation.

    Finding the PDE4 pathway opens new opportunities for drug discovery and basic research focused on high blood glucose (hyperglycemia) and insulin resistance. The scientists are eager to investigate the possibility of modifying FGF1 to improve PDE4 activity. Another route is targeting multiple points in the signaling pathway before PDE4 is activated.

    The unique ability of FGF1 to induce sustained glucose lowering in insulin-resistant diabetic mice is a promising therapeutic route for diabetic patients.

     Ronald M Evans, FGF1 and insulin control lipolysis by convergent pathways, Cell Metabolism (2022). DOI: 10.1016/j.cmet.2021.12.004www.cell.com/cell-metabolism/f … 1550-4131(21)00623-9

    https://medicalxpress.com/news/2022-01-route-blood-sugar-independen...

  • Dr. Krishna Kumari Challa

    Ecological coating for fruits and vegetables

    Plastic packaging in grocery stores protects fruits and vegetables from spoilage, but also creates significant amounts of waste. Researchers have now developed a protective cover for fruit and vegetables based on renewable raw materials. For this project, they used cellulose.  They spent more than a year developing a special protective cellulose coating that can be applied to fruits and vegetables. The result: Coated fruits and vegetables stay fresh significantly longer. In tests, the shelf life of, for instance, bananas was extended by more than a week. This significantly reduces food waste. 

    https://www.youtube.com/watch?v=JT77fj1eF3E&t=62s

    https://www.youtube.com/watch?v=9-5YZ2cNSEo

    Luana Amoroso et al, Sustainable Cellulose Nanofiber Films from Carrot Pomace as Sprayable Coatings for Food Packaging Applications, ACS Sustainable Chemistry & Engineering (2021). DOI: 10.1021/acssuschemeng.1c06345

    https://phys.org/news/2022-01-ecological-coating-bananas.html?utm_s...

  • Dr. Krishna Kumari Challa

    Designing war planes

  • Dr. Krishna Kumari Challa

    French Scientists Discover New Coronavirus Variant

    As the world continues to struggle with the rapid spread of the omicron variant of the coronavirus and the still-lingering delta variant, scientists in France say they have discovered a new variant that contains multiple mutations.

    Experts at the IHU Mediterranee Infection in Marseille said they had discovered the new variant in December in 12 patients living near Marseille, with the first patient testing positive after traveling to the central African nation of Cameroon.

    The French scientists said they had identified 46 mutations in the new variant, dubbed B.1.640.2, that could make it more resistant to vaccines and more infectious than the original virus.

    The results were posted on the online health sciences outlet MedRxiv, which publishes studies that have not been peer-reviewed or published in an academic journal. B.1.640.2 has neither been detected in other countries nor been labeled a "variant of concern" by the World Health Organization.

    https://www.voanews.com/a/french-scientists-discover-new-coronaviru...

  • Dr. Krishna Kumari Challa

    Nearly 2 million children worldwide develop asthma as a result of breathing in traffic-related pollution

    Nearly 2 million new cases of pediatric asthma every year may be caused by a traffic-related air pollutant, a problem particularly important in big cities around the world, according to a new study published recently. The study is the first to estimate the burden of pediatric asthma cases caused by this pollutant in more than 13,000 cities from Los Angeles to Mumbai.

    The study found that nitrogen dioxide puts children at risk of developing asthma and the problem is especially acute in urban areas. The findings suggest that clean air must be a critical part of strategies aimed at keeping children healthy.

    Here are some key findings from the study:

    • Out of the estimated 1.85 million new pediatric asthma cases attributed to NO2 globally in 2019, two-thirds occurred in urban areas.
    • The fraction of pediatric asthma cases linked to NO2 in urban areas dropped recently, probably due to tougher clean air regulations put in place by higher income countries like the United States.
    • Despite the improvements in air quality in Europe and the U.S., dirty air, and particularly NO2 pollution, has been rising in South Asia, Sub-Saharan African and the Middle East.
    • Pediatric asthma cases linked to NO2 pollution represent a large public health burden for South Asia and Sub-Saharan Africa.

    https://blogs.gwu.edu/sanenberg/pm2-5-no2-and-ozone-data-for-13000-...

     "Global urban temporal trends in fine particulate matter and attributable health burdens: estimates from global datasets," Lancet Planetary HealthDOI: 10.1016/S2542-5196(21)00350-8 , www.thelancet.com/journals/lan … (21)00350-8/fulltext

    "Long-term trends in urban NO2 concentrations and associated pediatric asthma incidence: estimates from global databases,", Lancet Planetary Health, DOI: 10.1016/S2542-5196(21)00255-2 , www.thelancet.com/journals/lan … (21)00255-2/fulltext

    https://medicalxpress.com/news/2022-01-million-children-worldwide-a...

  • Dr. Krishna Kumari Challa

    3D digital holograms on smartphones

    3D holograms, previously seen only in science fiction movies, may soon make their way to consumer technology. Until now, 3D holograms based on phase shifting holography method could be captured using a large, specialized camera with a polarizing filter. However, a  research group has just developed technology that can acquire holograms on mobile devices, such as smartphones.

    A research team  was successful in developing a photodiode that detects the polarization of light in the near-infrared region without additional polarization filters and thus, the realization of a miniaturized holographic image sensor for 3D digital holograms, using the 2D semiconductor materials: rhenium diselenide and tungsten diselenide.

    Photodiodes, which convert light into current signals, are essential components within the pixels of image sensors in digital and smartphone cameras. Introducing the ability to sense the polarization of light to the image sensor of an ordinary camera provides a variety of new information, enabling the storage of 3D holograms.

    Jongtae Ahn et al, Near-Infrared Self-Powered Linearly Polarized Photodetection and Digital Incoherent Holography Using WSe2/ReSe2 van der Waals Heterostructure, ACS Nano (2021). DOI: 10.1021/acsnano.1c06234

    https://phys.org/news/2022-01-3d-digital-holograms-smartphones.html...

  • Dr. Krishna Kumari Challa

    Physicists watch as ultracold atoms form a crystal of quantum tornadoes

    The world we experience is governed by classical physics. How we move, where we are, and how fast we're going are all determined by the classical assumption that we can only exist in one place at any one moment in time.

    But in the quantum world, the behavior of individual atoms is governed by the eerie principle that a particle's location is a probability. An atom, for instance, has a certain chance of being in one location and another chance of being at another location, at the same exact time.

    When particles interact, purely as a consequence of these quantum effects, a host of odd phenomena should ensue. But observing such purely quantum mechanical behavior of interacting particles amid the overwhelming noise of the classical world is a tricky undertaking.

    Now, MIT physicists have directly observed the interplay of interactions and quantum mechanics in a particular state of matter: a spinning fluid of ultracold atoms. Researchers have predicted that, in a rotating fluid, interactions will dominate and drive the particles to exhibit exotic, never-before-seen behaviors.

    In a study published today in Nature, the MIT team has rapidly rotated a quantum fluid of ultracold atoms. They watched as the initially round cloud of atoms first deformed into a thin, needle-like structure. Then, at the point when classical effects should be suppressed, leaving solely interactions and quantum laws to dominate the atoms' behavior, the needle spontaneously broke into a crystalline pattern, resembling a string of miniature, quantum tornadoes.

    This crystallization is driven purely by interactions, and tells us we're going from the classical world to the quantum world.

    Martin Zwierlein, Crystallization of bosonic quantum Hall states in a rotating quantum gas, Nature (2022). DOI: 10.1038/s41586-021-04170-2www.nature.com/articles/s41586-021-04170-2

    Richard J. Fletcher et al, Geometric squeezing into the lowest Landau level, Science (2021). DOI: 10.1126/science.aba7202

    https://phys.org/news/2022-01-physicists-ultracold-atoms-crystal-qu...

  • Dr. Krishna Kumari Challa

    Matter and antimatter seem to respond equally to gravity

    New Research has found that within the uncertainty of the experiment, matter and antimatter respond to gravity in the same way.

    Matter and antimatter create some of the most interesting problems in physics today. They are essentially equivalent, except that where a particle has a positive charge its antiparticle has a negative one. In other respects they seem equivalent. However, one of the great mysteries of physics today, known as "baryon asymmetry," is that, despite the fact that they seem equivalent, the universe seems made up entirely of matter, with very little antimatter. Naturally, scientists around the world are trying hard to find something different between the two, which could explain why we exist.

    As part of this quest, scientists have explored whether matter and antimatter interact similarly with gravity, or whether antimatter would experience gravity in a different way than matter, which would violate Einstein's weak equivalence principle. Now, the new work has shown, within strict boundaries, that antimatter does in fact respond to gravity in the same way as matter.

    To make the measurements, the team confined antiprotons and negatively charged hydrogen ions, which they used as a proxy for protons, in a Penning trap. In this device, a particle follows a cyclical trajectory with a frequency, close to the cyclotron frequency, that scales with the trap's magnetic-field strength and the particle's charge-to-mass ratio. By feeding antiprotons and negatively charged hydrogen ions into the trap, one at a time, they were able to measure, under identical conditions, the cyclotron frequencies of the two particle types, comparing their charge-to-mass ratios.

    By doing this, researchers were able to obtain a result that they are essentially equivalent, to a degree four times more precise than previous measures. To this level of CPT invariance, causality and locality hold in the relativistic quantum field theories of the Standard Model.

    Stefan Ulmer, A 16-parts-per-trillion measurement of the antiproton-to-proton charge–mass ratio, Nature (2022). DOI: 10.1038/s41586-021-04203-w

    https://phys.org/news/2022-01-antimatter-equally-gravity.html?utm_s...

  • Dr. Krishna Kumari Challa

    Magic Acid: Fluorosulfonic acid + Antimony pentafluoride

  • Dr. Krishna Kumari Challa

    New research shows gene exchange between viruses and hosts drives evolution

    The first comprehensive analysis of viral horizontal gene transfer (HGT) illustrates the extent to which viruses pick up genes from their hosts to hone their infection process, while at the same time hosts also co-opt useful viral genes.

    HGT is the movement of genetic material between disparate groups of organisms, rather than by the "vertical" transmission of DNA from parent to offspring. Previous studies have looked at HGT between bacteria and their viruses and have shown that it plays a major role in the movement of genes between bacterial species. However a new study, published in Nature Microbiology, looks at interactions between viruses and eukaryotes, which include animals, plants, fungi, protists and most algae.

    We knew from individual examples that viral genes have played a role in the evolution of eukaryotes. Even humans have viral genes, which are important for our development and brain function.

    Researchers  examined viral-eukaryotic gene transfer in the genomes of hundreds of eukaryotic species and thousands of viruses. They identified many genes that had been transferred and found that HGT from eukaryotes to viruses was twice as frequent as the reverse direction.

    In contrast to viruses, eukaryotic organisms retained fewer viral genes, although the ones that were kept appear to have had a major impact on host biology over evolutionary time.

    Many of these viral-derived genes appear to have repeatedly affected the structure and form of different organisms, from the cell walls of algae to the tissues of animals. This suggests that host-virus interactions may have played an important role in driving the diversity of life we see today. These transfers not only have evolutionary consequences for both virus and host, but could have important health implications.

    HGT allows genes to jump between species including viruses and their hosts. If the gene does something useful, it can sweep through the population and become a feature of that species. This can lead to a rapid emergence of new abilities, as opposed to the more incremental changes that result from smaller mutations.

    Although viruses such as Zika and coronaviruses do not appear to participate in these gene transfers, they often manipulate similar genes in their hosts through complex mechanisms. Future research into these transferred genes may therefore provide a novel approach for understanding the infection processes of these and other viruses which could be important for drug discovery.

    Nicholas A. T. Irwin, Alexandros A. Pittis, Thomas A. Richards, Patrick J. Keeling. Systematic evaluation of horizontal gene transfer between eukaryotes and virusesNature Microbiology, 2021; DOI: 10.1038/s41564-021-01026-3

    https://researchnews.cc/news/10930/New-research-shows-gene-exchange...

  • Dr. Krishna Kumari Challa

    Omicron struggles to infect the lungs

    Mounting evidence from animal studies suggests that the Omicron coronavirus variant does not multiply readily in lung tissue. This offers a tantalizing explanation for early hints that it causes less-serious disease than does the Delta variant: Omicron might not infect cells deep in the lung as readily as those in the .... Experiments in lung cells and lung organoids suggest that this could be because of a protein called TMPRSS2, which protrudes from the surfaces of many cells in the lungs. Omicron struggles to infect cells through TMPRSS2. Scientists emphasize that Omicron still threatens to overload health systems because of its hyper-transmissibility.

  • Dr. Krishna Kumari Challa

    “To the limits of our knowledge as humans, we’ve analysed and teste...

    Engineer Michael Kaplan, who kicked off the planning of the James Webb Space Telescope in the 1990s, gives insight into how the wildly ambitious project came to be — and what comes next. (The Times of Israel | 19 min read)

  • Dr. Krishna Kumari Challa

    Study explores how bacteria become drug resistant

    Researchers  have revealed recently more of the inner-workings of a two-stage "molecular motor" in the cell membrane that enables bacteria to become resistant to drugs.

    Their findings, which were reported recently in the journal Nature Chemical Biology, will aid the search for inhibitors that can "turn off" the protein, called an ABC transporter. They also inform efforts to block the human version of the transporter that enables tumor cells to become resistant to chemotherapy.

    Understanding how transporters work is essential to developing drugs to block them.

    A primary vehicle for resistance is the multi-drug ABC (ATP-binding cassette) exporter. ABC exporters use ATP hydrolysis—the release of chemical energy stored in ATP molecules—to traffic a wide variety of molecules across cell membranes.

    ATP energy provides the power for ABC exporters to bind toxic chemicals, then turn around and expel them from the cell. In the case of antibiotic-resistant bacteria, however, this survival tactic can prove deadly to the human host they have invaded.

    Part1

  • Dr. Krishna Kumari Challa

    Researchers used a technique called electron paramagnetic resonance (EPR) spectroscopy to identify previously unreported changes in the shape, or conformation, of the ABC exporter from a bacterium called Bacillus subtilis as it interacts with ATP.

    They proposed that ATP power, in a series of complex steps, drives the transition between inward-facing and outward-facing conformations of the exporter. After binding the antibiotic, for example, the exporter "turns around" so it can expel its cargo from the cell.

    This motion is driven by the transduction (conversion) of chemical energy into mechanical energy resulting from asymmetrical and sequential binding of two ATP molecules to different parts of the protein complex (the ATP binding cassettes). Asymmetrical binding thus drives conformational change.

    To prove their theory, the researchers had to capture an image of the conformational change. So they turned to another resource, cryogenic electron microscopy, which enables measurement of atomic distances at cryogenic temperatures, below minus 320 degrees Fahrenheit.

    The cryo-EM studies were conducted at the Pacific Northwest Center for Cryo-EM in Portland, Ore. In combination with an EPR spectroscopy method called DEER and molecular dynamics simulation, the studies revealed for the first time an ATP-loaded, inward-facing structure with two drug molecules bound asymmetrically.

    This conformation suggests that drugs could be designed to prevent the bacterial exporter from turning around and expelling the antibiotic by "trapping" it in its inward-facing state.

    Tarjani M. Thaker et al, Asymmetric drug binding in an ATP-loaded inward-facing state of an ABC transporter, Nature Chemical Biology (2021). DOI: 10.1038/s41589-021-00936-x

    https://phys.org/news/2022-01-explores-bacteria-drug-resistant.html...

  • Dr. Krishna Kumari Challa

     Researchershave discovered details of how proteins produced by oral epithelial cells protect humans against viruses entering the body through the mouth. They also found that oral bacteria can suppress the activity of these cells, increasing vulnerability to infection.

    A family of proteins known as interferon lambdas produced by epithelial cells in the mouth serve to protect humans from viral infection, but the oral bacteria Porphyromonas gingivalis reduces the production and effectiveness of those important frontline defenders.

    Researchers found that certain pathogenic bacterial species, P. gingivalis, which cause periodontal disease, can completely suppress interferon production and severely enhance susceptibility to viral infection. These resident oral plaque bacteria play a key role in regulating anti-viral responses.

    he mouth often is a gateway into the body for viruses that infect the gastrointestinal tract and lungs such as SARS-CoV-2, human immunodeficiency virus (HIV), herpes simplex and cancer-causing viruses such as human papillomavirus (HPV).

    P. gingivalis, a common oral bacterium that causes periodontal disease, has been linked to numerous other diseases, including Alzheimer's disease and rheumatoid arthritis. Recent clinical studies have shown that immune suppression in patients with periodontitis can enhance susceptibility to HIV, herpes simplex and HPV.

    Improved understanding of how interferons provide broad antiviral protection and activate antiviral genes to protect people from viruses, as well as how P. gingivalis compromises their protection, may lead researchers to clinical approaches to increase that protection. Research  has revealed connections between P. gingivalis and multiple other diseases and conditions, including rheumatoid arthritis, Alzheimer's disease and esophageal cancer.

    1. Carlos J. Rodriguez-Hernandez, Kevin J. Sokoloski, Kendall S. Stocke, Himabindu Dukka, Shunying Jin, Melissa A. Metzler, Konstantin Zaitsev, Boris Shpak, Daonan Shen, Daniel P. Miller, Maxim N. Artyomov, Richard J. Lamont, Juhi Bagaitkar. Microbiome-mediated incapacitation of interferon lambda production in the oral mucosa. Proceedings of the National Academy of Sciences, 2021; 118 (51): e2105170118 DOI: 10.1073/pnas.2105170118

    https://researchnews.cc/news/10948/Researchers-reveal-how-oral-bact...

  • Dr. Krishna Kumari Challa

    How the Heart Changes with Exercise

  • Dr. Krishna Kumari Challa

    This long-lasting hydrogel could be used to replace damaged human tissues

  • Dr. Krishna Kumari Challa

    Engineered nanomaterial captures off-target cancer drug to prevent tissue damage

     Standard chemotherapies may efficiently kill cancer cells, but they also pose significant risks to healthy cells, resulting in secondary illness and a diminished quality of life for patients. To prevent the previously unavoidable damage, researchers have developed a new class of nanomaterials engineered to capture chemotherapy drugs before they interact with healthy tissue.

    The method, now available online prior to the March issue of Materials Today Chemistry, is based on hairy cellulose nanocrystals—nanoparticles developed from the main component of plant cell walls and engineered to have immense numbers of polymer chain "hairs" extending from each end. These hairs increase the potential drug capture capacity of the nanocrystals significantly beyond that of conventional nanoparticles and ion exchange resins.

    For some organs, like the liver, chemotherapy can be locally administered through catheters. If we could place a device based on the nanocrystals to capture the excess drugs exiting the liver's inferior vena cava, a major blood vessel, clinicians could potentially administer higher doses of chemotherapy to kill the cancer more quickly without worry about damaging healthy cells. Once the treatment is finished, the device could be removed.

    To produce the hairy cellulose nanocrystals capable of capturing chemotherapy drugs, the researchers chemically treated cellulose fibers found in softwood pulp and imparted a negative charge on the hairs, making them stable against the ionic composition of blood. According to the researchers this corrects a fault of conventional nanoparticles, whose charge can be rendered inert or reduced when exposed to blood, limiting the number of positively charged drug molecules with which it can bind to insignificant numbers.

    The nanocrystals' binding efficacy was tested in human serum, the protein-rich portion of blood that does not contain red or white blood cells or platelets. For every gram of hairy cellulose nanocrystals, more than 6,000 milligrams of DOX were effectively removed from the serum.

    The researchers also found that the nanocrystals had no harmful effect on red blood cells in whole blood or on cell growth in human umbilical vein endothelial cells.

    1. Sarah A.E. Young, Joy Muthami, Mica Pitcher, Petar Antovski, Patricia Wamea, Robert Denis Murphy, Reihaneh Haghniaz, Andrew Schmidt, Samuel Clark, Ali Khademhosseini, Amir Sheikhi. Engineering hairy cellulose nanocrystals for chemotherapy drug capture. Materials Today Chemistry, 2022; 23: 100711 DOI: 10.1016/j.mtchem.2021.100711

    https://researchnews.cc/news/10976/Engineered-nanomaterial-captures...

  • Dr. Krishna Kumari Challa

    Risk of Death For Female Patients Is Much Higher if Surgeon Is a Man, Study Reveals

    For female patients, operation outcomes tend to be significantly better when their surgeon is also female, recent research out of Canada has found.

    No one really knows why that is just yet, but a new model comparing the sex of the surgeon, the sex of the patient, and the outcomes of the surgery have now revealed an implicit bias that could be costing patients their health and even their lives.

    The data is based on more than 1.3 million patients who underwent one of 21 common elective surgeries in Ontario, Canada between 2007 and 2019.

    Overall, the analysis suggests that when a male surgeon treats a female patient, that patient is 16 percent more likely to experience complications, 20 percent more likely to remain in the hospital for longer, and 32 percent more likely to die than if they were treated by a female surgeon.

    On the other hand, male patients treated by a female surgeon were only 2 percent more likely to experience complications, and 13 percent less likely to die than if they had seen a male surgeon.

    The underlying reason or reasons for this discrepancy in care remains unclear, but this isn't the first time a study has found a patient's sex might impact how their doctor treats them.

    In 2018, female patients in Florida hospitals who were seeking care for heart attacks were found to have higher mortality when treated by male physicians.

    In comparison, female physicians had more consistent outcomes no matter whether their patient was male or female.

    Interestingly, male surgeons who had more exposure to female physicians and female patients had better outcomes for women.

    While some past studies suggest female physicians prescribe different follow-up tests and medications compared to male doctors, or that they listen more to their patients, further research is needed to determine which factors are influencing these outcomes the most. Once we can figure that out, we can start to mend the bias.

    https://jamanetwork.com/journals/jamasurgery/article-abstract/2786671

    https://www.sciencealert.com/female-patients-are-much-likelier-to-s...

  • Dr. Krishna Kumari Challa

    What is 5G?

    5G stands for fifth-generation cellular network technology.

    It's the technology that enables wireless communication—for example, from your cellular phone to a cell tower, which channels it to the internet. 5G is a network service provided by telecommunications carriers and is not the same thing as the 5 GHz band on your Wi-Fi router.

    5G offers an order of magnitude—10 times—more bandwidth than its predecessor, 4G. The greater bandwidth is possible because over and above low and medium frequency radio waves, 5G uses additional higher-frequency waves to encode and carry information.

    Bandwidth is analogous to the width of a highway. The broader the highway, the more lanes it can have and the more cars it can carry at the same time. This makes 5G much faster and able to handle many more devices.

    5G can deliver speeds of around 50 megabits per second, up to more than 1 gigabit per second. A gigabit per second connection allows you to download a high-definition movie in less than a minute. Does this mean no more bad cell connections in crowded places? The increased bandwidth will help, but just as increasing the number of lanes on highways does not always reduce traffic jams, as more people use the expanded highways, 5G is likely to carry a lot more traffic than 4G networks, so you still might not get a good connection sometimes.

    In addition to connecting your phone and cellular-enabled laptop, 5G will be connecting many other devices ranging from photo frames to toasters as part of the Internet of Things revolution. So even though 5G can handle up to a million devices per square kilometer, all that bandwidth could be quickly used up and require more—a future 5.5G with even more bandwidth.

    Part1

  • Dr. Krishna Kumari Challa

    5G can use low-, mid- and high-band frequencies, each with advantages and disadvantages. Lower-frequency waves can travel farther but are slower. Higher-frequency waves travel faster but can go only limited distances. Higher-frequency 5G can achieve gigabit-per-second speeds, which promises to render ethernet and other wired connections obsolete in the future. Currently, however, the higher frequency comes at a higher cost and thus is deployed only where it's most needed: in crowded urban settings, stadiums, convention centers, airports and concert halls.

    A type of 5G service, Ultra-Reliable and Low-Latency Communications, can be used where data needs to be transmitted without loss or interruption in service—for example, controlling drones in disaster areas. One day, after the technology is more robust, it could even be used for remote surgery.

    https://theconversation.com/what-is-5g-an-electrical-engineer-expla...

    Part 2

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